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1

Systems Analysis of the Genetic Interaction Network of Yeast Molecular Chaperones

Rizzolo, Kamran, Kumar, Ashwani, Kakihara, Yoshito, Phanse, Sadhna, Minic, Zoran, Snider, Jamie, Stagljar, Igor, Zilles, Sandra, Babu, Mohan, Houry, Walid A.

Journal:

Molecular Omics

Year:

2018

Language:

english

File:

PDF, 2.45 MB

english, 2018

2

The role of Hsp90 in protein complex assembly

Taras Makhnevych, Walid A. Houry

Journal:

Biochimica et Biophysica Acta (BBA) - Molecular Cell Research

Year:

2012

Language:

english

File:

PDF, 544 KB

english, 2012

3

Exosome-Bound WD Repeat Protein Monad Inhibits Breast Cancer Cell Invasion by Degrading Amphiregulin mRNA

Saeki, Makio, Egusa, Hiroshi, Kamano, Yuya, Kakihara, Yoshito, Houry, Walid A., Yatani, Hirofumi, Noguchi, Shinzaburo, Kamisaki, Yoshinori, Rishi, Arun

Journal:

Year:

2013

Language:

english

File:

PDF, 1.59 MB

english, 2013

4

The PAQosome, an R2TP-Based Chaperone for Quaternary Structure Formation

Houry, Walid A., Bertrand, Edouard, Coulombe, Benoit

Journal:

Trends in Biochemical Sciences

Year:

2018

Language:

english

File:

PDF, 1.24 MB

english, 2018

5

Mechanisms of Acid Resistance in Escherichia coli

Kanjee, Usheer, Houry, Walid A.

Journal:

Annual Review of Microbiology

Year:

2013

Language:

english

File:

PDF, 3.91 MB

english, 2013

6

10.1038/45977

Hartl, F. Ulrich, Houry, Walid A., Frishman, Dmitrij, Eckerskorn, Christoph, Lottspeich, Friedrich

Journal:

Year:

1999

Language:

english

File:

PDF, 387 KB

english, 1999

7

MoxR AAA+ ATPases: A novel family of molecular chaperones?

Jamie Snider, Walid A. Houry

Journal:

Journal of Structural Biology

Year:

2006

Language:

english

File:

PDF, 462 KB

english, 2006

8

Acid stress response in enteropathogenic gammaproteobacteria: an aptitude for survivalThis paper is one of a selection of papers published in this special issue entitled “Canadian Society of Biochemistry, Molecular & Cellular Biology 52nd Annual Meeting — Protein Folding: Principles and Diseases” and has undergone the Journal's usual peer review process.

Zhao, Boyu, Houry, Walid A.

Journal:

Biochemistry and Cell Biology

Year:

2010

Language:

english

File:

PDF, 463 KB

english, 2010

9

The Enzymatic Activities of the Escherichia coli Basic Aliphatic Amino Acid Decarboxylases Exhibit a pH Zone of Inhibition

Kanjee, Usheer, Gutsche, Irina, Ramachandran, Shaliny, Houry, Walid A.

Journal:

Year:

2011

Language:

english

File:

PDF, 4.15 MB

english, 2011

10

Comparison of the multiple oligomeric structures observed for the Rvb1 and Rvb2 proteinsThis paper is one of a selection of papers published in this special issue entitled 8th International Conference on AAA Proteins and has undergone the Journal's usual peer review process.

Cheung, Kevin L. Y., Huen, Jennifer, Houry, Walid A., Ortega, Joaquin

Journal:

Biochemistry and Cell Biology

Year:

2010

Language:

english

File:

PDF, 1.48 MB

english, 2010

11

Chemical Modulation of the Human Mitochondrial ClpP: Potential Application in Cancer Therapeutics

Wong, Keith S, Houry, Walid A

Journal:

ACS Chemical Biology

Year:

2019

Language:

english

File:

PDF, 20.13 MB

english, 2019

12

In Vivo Observation of Polypeptide Flux through the Bacterial Chaperonin System

Karla L Ewalt, Joseph P Hendrick, Walid A Houry, F.Ulrich Hartl

Journal:

Year:

1997

Language:

english

File:

PDF, 520 KB

english, 1997

13

Total Synthesis and Antibacterial Testing of the A54556 Cyclic Acyldepsipeptides Isolated from Streptomyces hawaiiensis

Goodreid, Jordan D., Wong, Keith, Leung, Elisa, McCaw, Shannon E., Gray-Owen, Scott D., Lough, Alan, Houry, Walid A., Batey, Robert A.

Journal:

Journal of Natural Products

Year:

2014

Language:

english

File:

PDF, 1.36 MB

english, 2014

14

Architecture and Nucleotide-Dependent Conformational Changes of the Rvb1-Rvb2 AAA+ Complex Revealed by Cryoelectron Microscopy

Ewens, Caroline A., Su, Min, Zhao, Liang, Nano, Nardin, Houry, Walid A., Southworth, Daniel R.

Journal:

Year:

2016

Language:

english

File:

PDF, 2.85 MB

english, 2016

15

The nature of the initial step in the conformational folding of disulphide-intact ribonuclease A

Houry, Walid A., Rothwarf, David M., Scheraga, Harold A.

Journal:

Natural Structural Biology

Year:

1995

File:

PDF, 972 KB

1995

16

Strategies for purification of the bacteriophage HK97 small and large terminase subunits that yield pure and homogeneous samples that are functional

Weiditch, Sasha A., Seraphim, Thiago V., Houry, Walid A., Kanelis, Voula

Journal:

Protein Expression and Purification

Year:

2019

Language:

english

File:

PDF, 42.19 MB

english, 2019

17

Sorafenib as an Inhibitor of RUVBL2

Nano, Nardin, Ugwu, Francisca, Seraphim, Thiago V., Li, Tangzhi, Azer, Gina, Isaac, Methvin, Prakesch, Michael, Barbosa, Leandro R. S., Ramos, Carlos H. I., Datti, Alessandro, Houry, Walid A.

Journal:

Year:

2020

File:

PDF, 9.42 MB

2020

18

AAA+ proteins

Seraphim, Thiago V., Houry, Walid A.

Journal:

Current Biology

Year:

2020

File:

PDF, 3.87 MB

2020

19

ClpP: A distinctive family of cylindrical energy-dependent serine proteases

Angela Yeou Hsiung Yu, Walid A. Houry

Journal:

Year:

2007

Language:

english

File:

PDF, 1.72 MB

english, 2007

20

PIH1D1 interacts with mTOR complex 1 and enhances ribosome RNA transcription

Kamano, Yuya, Saeki, Makio, Egusa, Hiroshi, Kakihara, Yoshito, Houry, Walid A., Yatani, Hirofumi, Kamisaki, Yoshinori

Journal:

Year:

2013

Language:

english

File:

PDF, 1.10 MB

english, 2013

21

Hsp90 at the crossroads of genetics and epigenetics

Wong, Keith SK, Houry, Walid A

Journal:

Year:

2006

Language:

english

File:

PDF, 993 KB

english, 2006

22

An atlas of chaperone–protein interactions in Saccharomyces cerevisiae: implications to protein folding pathways in the cell

Gong, Yunchen, Kakihara, Yoshito, Krogan, Nevan, Greenblatt, Jack, Emili, Andrew, Zhang, Zhaolei, Houry, Walid A

Journal:

Molecular Systems Biology

Year:

2009

Language:

english

File:

PDF, 3.29 MB

english, 2009

23

Structure of RavA MoxR AAA+ protein reveals the design principles of a molecular cage modulating the inducible lysine decarboxylase activity

Majida El Bakkouri, Irina Gutsche, Usheer Kanjee, Boyu Zhao, Miao Yu, Gael Goret, Guy Schoehn, Wim P. Burmeister, Walid A. Houry and Gregory A. Petsko

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.70 MB

english, 2010

24

Rvb1–Rvb2: essential ATP-dependent helicases for critical complexesThis paper is one of a selection of papers published in this special issue entitled 8th International Conference on AAA Proteins and has undergone the Journal's usual peer review process.

Huen, Jennifer, Kakihara, Yoshito, Ugwu, Francisca, Cheung, Kevin L. Y., Ortega, Joaquin, Houry, Walid A.

Journal:

Biochemistry and Cell Biology

Year:

2010

Language:

english

File:

PDF, 577 KB

english, 2010

25

Alternative Oligomeric States of the Yeast Rvb1/Rvb2 Complex Induced by Histidine Tags

Kevin L.Y. Cheung, Jennifer Huen, Yoshito Kakihara, Walid A. Houry, Joaquin Ortega

Journal:

Journal of Molecular Biology

Year:

2010

Language:

english

File:

PDF, 2.23 MB

english, 2010

26

Definition of Amide Protection Factors for Early Kinetic Intermediates in Protein Folding

Walid A. Houry, J. Michael Sauder, Heinrich Roder and Harold A. Scheraga

Journal:

Proceedings of the National Academy of Sciences

Year:

1998

Language:

english

File:

PDF, 677 KB

english, 1998

27

Structural insights into the Escherichia coli lysine decarboxylases and molecular determinants of interaction with the AAA+ ATPase RavA

Kandiah, Eaazhisai, Carriel, Diego, Perard, Julien, Malet, Hélène, Bacia, Maria, Liu, Kaiyin, Chan, Sze W. S., Houry, Walid A., Ollagnier de Choudens, Sandrine, Elsen, Sylvie, Gutsche, Irina

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 2.52 MB

english, 2016

28

The Role of Pontin and Reptin in Cellular Physiology and Cancer Etiology

Mao, Yu-Qian, Houry, Walid A.

Journal:

Frontiers in Molecular Biosciences

Year:

2017

Language:

english

File:

PDF, 4.78 MB

english, 2017

29

AAA+ proteins: diversity in function, similarity in structure

Snider, Jamie, Houry, Walid A.

Journal:

Biochemical Society Transactions

Year:

2008

Language:

english

File:

PDF, 553 KB

english, 2008

30

Mechanism of substrate recognition by the chaperonin GroEL

Journal:

Biochemistry and Cell Biology

Year:

2001

File:

PDF, 1.67 MB

2001

31

Role of the N-Terminal Domain of the Chaperone ClpX in the Recognition and Degradation of Lambda Phage Protein O

Thibault, Guillaume, Houry, Walid A.

Journal:

Journal of Physical Chemistry B

Year:

2012

Language:

english

File:

PDF, 4.83 MB

english, 2012

32

The AAA+ proteins Pontin and Reptin enter adult age: from understanding their basic biology to the identification of selective inhibitors

Matias, Pedro M., Baek, Sung Hee, Bandeiras, Tiago M., Dutta, Anindya, Houry, Walid A., Llorca, Oscar, Rosenbaum, Jean

Journal:

Frontiers in Molecular Biosciences

Year:

2015

Language:

english

File:

PDF, 1.19 MB

english, 2015

33

Circular Dichroism Evidence for the Presence of Burst-Phase Intermediates on the Conformational Folding Pathway of Ribonuclease A †

Houry, Walid A., Rothwarf, David M., Scheraga, Harold A.

Journal:

Year:

1996

Language:

english

File:

PDF, 345 KB

english, 1996

34

The Molecular Chaperones Interaction Networks in Protein Folding and Degradation ||

Houry, Walid A.

Year:

2014

Language:

english

File:

PDF, 12.23 MB

english, 2014

35

Dynamics of the ClpP serine protease: A model for self-compartmentalized proteases

Liu, Kaiyin, Ologbenla, Adedeji, Houry, Walid A.

Journal:

Critical Reviews in Biochemistry and Molecular Biology

Year:

2014

Language:

english

File:

PDF, 1.61 MB

english, 2014

36

The Molecular Chaperones Interaction Networks in Protein Folding and Degradation || Chaperones and Proteases of Mitochondria: From Protein Folding and Degradation to Mitophagy

Houry, Walid A.

Year:

2014

Language:

english

File:

PDF, 1.58 MB

english, 2014

37

A Very Fast Phase in the Refolding of Disulfide-Intact Ribonuclease A: Implications for the Refolding and Unfolding Pathways

Houry, Walid A., Rothwarf, David M., Scheraga, Harold A.

Journal:

Year:

1994

Language:

english

File:

PDF, 1.80 MB

english, 1994

38

Structure of a Hydrophobically Collapsed Intermediate on the Conformational Folding Pathway of Ribonuclease A Probed by Hydrogen−Deuterium Exchange †

Houry, Walid A., Scheraga, Harold A.

Journal:

Year:

1996

Language:

english

File:

PDF, 528 KB

english, 1996

39

The R2TP complex: Discovery and functions

Yoshito Kakihara, Walid A. Houry

Journal:

Biochimica et Biophysica Acta (BBA) - Molecular Cell Research

Year:

2012

Language:

english

File:

PDF, 369 KB

english, 2012

40

Navigating the Chaperone Network: An Integrative Map of Physical and Genetic Interactions Mediated by the Hsp90 Chaperone

Rongmin Zhao, Mike Davey, Ya-Chieh Hsu, Pia Kaplanek, Amy Tong, Ainslie B. Parsons, Nevan Krogan, Gerard Cagney, Duy Mai, Jack Greenblatt, Charles Boone, Andrew Emili, Walid A. Houry

Journal:

Year:

2005

Language:

english

File:

PDF, 701 KB

english, 2005

41

Structure of Minimal Tetratricopeptide Repeat Domain Protein Tah1 Reveals Mechanism of Its Interaction with Pih1 and Hsp90

Jiménez, Beatriz, Ugwu, Francisca, Zhao, Rongmin, Ortí, Leticia, Makhnevych, Taras, Pineda-Lucena, Antonio, Houry, Walid A.

Journal:

Journal of Biological Chemistry

Year:

2012

Language:

english

File:

PDF, 3.18 MB

english, 2012

42

Yeast Rvb1 and Rvb2 are ATP-Dependent DNA Helicases that Form a Heterohexameric Complex

Anna Gribun, Kevin L.Y. Cheung, Jennifer Huen, Joaquin Ortega, Walid A. Houry

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 1.83 MB

english, 2008

43

Development and Characterization of Potent Cyclic Acyldepsipeptide Analogues with Increased Antimicrobial Activity

Goodreid, Jordan D., Janetzko, John, Santa Maria, John P., Wong, Keith S., Leung, Elisa, Eger, Bryan T., Bryson, Steve, Pai, Emil F., Gray-Owen, Scott D., Walker, Suzanne, Houry, Walid A., Batey, Robe

Journal:

Journal of Medicinal Chemistry

Year:

2016

Language:

english

File:

PDF, 6.72 MB

english, 2016

44

The RavA-ViaA Chaperone-Like System Interacts with and Modulates the Activity of the Fumarate Reductase Respiratory Complex

Wong, Keith S., Bhandari, Vaibhav, Janga, Sarath Chandra, Houry, Walid A.

Journal:

Journal of Molecular Biology

Year:

2017

Language:

english

File:

PDF, 859 KB

english, 2017

45

Editorial: The Role of AAA+ Proteins in Protein Repair and Degradation

Shorter, James, Houry, Walid A.

Journal:

Frontiers in Molecular Biosciences

Year:

2018

Language:

english

File:

PDF, 362 KB

english, 2018

46

An auto-indexing method for Arabic text

Nashat Mansour, Ramzi A. Haraty, Walid Daher, Manal Houri

Journal:

Information Processing & Management

Year:

2008

Language:

english

File:

PDF, 131 KB

english, 2008

47

Structural and Theoretical Studies Indicate that the Cylindrical Protease ClpP Samples Extended and Compact Conformations

Matthew S. Kimber, Angela Yeou Hsiung Yu, Mikael Borg, Elisa Leung, Hue Sun Chan, Walid A. Houry

Journal:

Year:

2010

Language:

english

File:

PDF, 1.49 MB

english, 2010

48

Direct binding targets of the stringent response alarmone (p)ppGpp

Usheer Kanjee, Koji Ogata, Walid A. Houry

Journal:

Molecular Microbiology

Year:

2012

Language:

english

File:

PDF, 1.70 MB

english, 2012

49

Hsp90: a chaperone for protein folding and gene regulation

Zhao, Rongmin, Houry, Walid A

Journal:

Biochemistry and Cell Biology

Year:

2005

File:

PDF, 339 KB

2005

50

An Assay for Measuring the Activity of Escherichia coli Inducible Lysine Decarboxyase

Kanjee, Usheer, Houry, Walid A.

Journal:

Journal of Visualized Experiments

Year:

2010

Language:

english

File:

PDF, 269 KB

english, 2010

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